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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs74375546 chr22:50089500 G/A C2orf42 chr2:70377012-70475747:- -0.48 -6.19 1.26E-9 Box Plot
THCA rs74394882 chr5:43650790 T/A UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs74412626 chr1:144570551 C/T LOC728855 chr1:149576161-149672983:+ 0.33 6.73 4.84E-11 Box Plot
THCA rs74412626 chr1:144570551 C/T NBPF14 chr1:148003642-148025863:- 0.58 15.42 7.76E-44 Box Plot
THCA rs74428236 chr2:132205864 G/C CCDC74B chr2:130896860-130902707:- 0.36 6.44 2.85E-10 Box Plot
THCA rs7442966 chr5:49606650 G/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.73 6.5E-14 Box Plot
THCA rs7443384 chr5:45960893 A/G LOC647121 chr1:121260910-121313686:+ 0.34 7.12 4.07E-12 Box Plot
THCA rs7443410 chr5:45960933 C/T LOC647121 chr1:121260910-121313686:+ 0.37 7.76 5.24E-14 Box Plot
THCA rs7443976 chr5:45936425 A/T LOC647121 chr1:121260910-121313686:+ 0.34 7.25 1.73E-12 Box Plot
THCA rs7444405 chr5:45915475 T/A LOC647121 chr1:121260910-121313686:+ 0.37 7.85 2.7E-14 Box Plot
THCA rs7445572 chr5:45920417 C/T LOC647121 chr1:121260910-121313686:+ 0.37 7.9 1.91E-14 Box Plot
THCA rs7446182 chr5:45401817 A/T LOC647121 chr1:121260910-121313686:+ -0.35 -7.25 1.67E-12 Box Plot
THCA rs7446360 chr5:49684783 C/T LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs74476654 chr1:174924970 A/G SERPINC1 chr1:173872942-173886516:- 0.73 8.83 2.04E-17 Box Plot
THCA rs7447717 chr5:45770252 A/G LOC647121 chr1:121260910-121313686:+ -0.37 -8.03 7.61E-15 Box Plot